Functions

• Bulk Cell Preprocessing
  • read_counts2tpm()
• Simulation
  • BulkGEPGenerator
  • SingleCellTypeGEPGenerator
  • filtering_by_gene_list_and_pca_plot()
  • get_gene_list_for_filtering()
  • random_generation_fraction()
  • segment_generation_fraction()
• Deconvolution
  • DeSide
• Plot
  • plot_corr_two_columns()
  • plot_predicted_result()
• Utility
  • log_exp2cpm()
  • non_log2cpm()
  • non_log2log_cpm()
  • read_data_from_h5ad()
  • ReadExp
  • ReadH5AD